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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920211.1_cds_XP_016469387.1_61934
CDS Infomation

[gene=LOC107791768] [db_xref=GeneID:107791768] [protein=exocyst complex component SEC8-like] [protein_id=XP_016469387.1] [location=join(94565..94606,95443..95655,96981..97154,99450..99554,99925..100034,100313..100492,100741..100903,101050..101156,101733..102031,102336..102499,102647..102762,105610..105680,105872..106002,106086..106135,107279..107379,108345..108457,108656..108763,109507..109704,110318..110403,111118..111313,111396..111473,112330..112431,112525..112599,112825..112920,113017..113066,113155..113242)] [gbkey=CDS]
Sequence

ATGGGAAAATTTGATCTACTGCCGATTCCTAAGGACAAATCGTACTTAAGGGAGGAACTT
GCTAGGGTAGACGAGAACTGGGCTGCTGCTCGGTTTGATTCACTGCCTCATGTTGTTCGT
ATATTGACCTCGAAAGATCGTGAAGGTGATGTCCAGGTCTTAAAGGAGCAGAGTGAAATT
ATTGAGGAAGTTGTAGATGAAGTAGTGCATGCCTACCATGGTGGCTTCAATAAAGCTATT
CAAAATTATTCTCAGATTTTGCGGTTATTCAGTGAATCTACCCAAAGTATTGGTGTTTTA
AAAGGTGACTTGGCGGAGGCTAAGAAGCTTCTTGGTGCCAGAAACAAGCAGTTGCATCAG
TTGTGGTATCGCTCTGTTACATTGCGACATATTATCTCCTTGTTAGATCAAATAGAAGGC
ATAGCTAAGGTTCCTGCTCGTATTGAAAAGCTGATTAATGAAAAGCAGTTCTACGCTGCC
GTGCAGTTGCATGTTCAATCAGCTCTTATGCTTGAGCGAGAGGGCCTTCAAACGGTTGGT
GCTTTACAAGATGTCAGATCTGAGTTGACAAAGCTACGAGGCGTTCTTTTCTATAAAGTT
TTGGAGGATCTGCATGCCCATCTTTATAATAAGGGTGAATACAGCTCAACTCTCTTCAGT
ATCAGTGAAAGGGACGATGAAGTACCGACCACTGTTGCTGTACCATTGTCCATGAACAAC
TCACAGCCTCTCTCTCGAAGAACTAGGTTGCTAAAAGGTGAAAATCAGTTTGGTTCATTT
GGACCTGGGGATGGATCTCACAGAACTAGCTCTATTGATGGCAGCTCTGTAGCAGAAGGT
CATGATGAGGATGGTGAAGATACTGTGTCAGATGGCTATCCTACCTCTTTAAGGATTAAT
GGCACTGATGGTGCTTCGAAGGATGTCAAAATGGTTTCTCATCAAATTCCGACATGGCTT
TCAGATTCTACACCAGATGAATTTGTTGAAGCAATCAGGAAAACTGAAGCCCCGTTGCAT
GTGAAGTACTTGCAGACCATGGTGGAGTGCCTTTGCATGCTTGGGAAAGTTGCAGCAGCA
GGAGCCATAATATGCCAAAGGTTGCGGCCTACAATTCATGAGATAATCACAACAAAGATC
AAAGCTCATGCAGAAAATGCTCCACGGCCTGGCATTGGCCAGGCTGCCCAAGCAGCCATT
ACTGGTCTTCACTATCTAAAAGGGCAGTTGGAGAGTTTTCAGTCATCGAAACAGAAGCAT
CAGAATGGGATATATCTTGCAGTGCTACTAGCAGTCAGCCCTGTTTCACCTGTCATGGCT
CCTACAGGAACAGCACAGGCTGCTGCAAAGGAACTCCTTGATTCAATTCTTGATACTGTT
GTTCATATATTTGAGAATCATGTCATTGTTGGAGAACTTCTTGAGTCAAAGTGCTCGCAA
CAAGTTGACCTGAACACGCCTAAGTCCATGCCTACAGACATCAGTTGGAACCCTGATTCA
GATGCTTCTCGTGACACTGGAGGCTATAGTATTGGCTTTTCATTGACTGTCTTACAGAGT
GAATGCCAGCAACTCATATGTGAGATCCTGCGAGCTACTCCAGAAGCTGCATCCGCAGAT
GCTGCTGTCCAAACAGCAAGACTTGCAAGCAAGGCCCCTTCAAAGGATAAGAGGGATGGG
TCAGAAGATGGTCTAACATTTGCATTTCGTTTCACAGATGCTACTCTATCCATTTCAAAT
CAAGGGGTTGATCTCATTAGGCAAGGATGGAGTAAGAGAGGCTCCAATGTGCTCCAAGAA
GGTTATGGTACAGCAGCTATTTTACCTGAGCAGGGAATTTATTTAGCAGCCTCGTTATAC
CGGCCTGTTCTTCAGTTCACGGATAAAGTCGCTTCCATGCTGCCACAGAAGTACTCGCAA
CTTGGGAATGATGGACTTCTGGCATTTGTGGAGAACTTTGTGAAGGATCACTTCTTACCA
GCAATGTTTGTTGATTATCGGAAAGCTGTACAGCAGGCAATATCAAGCCCAGCGGCATTT
CGTCCACGCGCGCATGCTGTCACATCTTATACCCCATTGGTTGAGAAAGGTCGACCTATC
CTGCAAGGACTTTTGGCAATAGATTTCTTAGCAAAAGAGGTGCTTGGATGGGCACAAGCA
ATGCCAAAGTTTGCTGTTGCTCTTGTGAACTATGTTCAAACTTTTCTTGAAAGAACATAT
GAAAGATGTCGCACTTCATACATGGAGGCAGTTCTTGAGAAGCAAAGTTATATGCTCATT
GGCAGACATGATATTGAAAATCTGATGCGACGCGATCCAGCCAGTACGTGTTTACCCTGT
TCAATTGGTGAGCTAAATGCAGAAAATGGTGCTGCCAATGCTGAAAATTTGGAGGTTGAA
ATGGAAATCAGCGACACGTTATTGAATTTGAGGCCAATCAGACAGGAAAACTTGATTCGT
GATGATAACAAGCTAATTTTACTGGCATCTTTAAGTGATTCATTGGAATATGTTGCTGAT
TCAATTGAAAGGCTTGGGAAGATTTGCCCTAGCACATCAAATCAGGTAGAAGAAAATGTG
AAGCAGAAAGCTCCAAAGCATTCTAGAACAAGCAGTATACCTCCTAAGGATTTGACATCT
TTCGCTGAAGAATATAAGAAACTTGCAATTGATTGCCTCAAGGTTCTTCGTGTGGAGATG
CAATTGGAGACTATTTTTCATCTGCAGGAAATGACGAGTAAGGAATACCTGGATGATCAA
GATGCAGAGGAGCCGGATGATTATATAATTTCGTTAACTTCCCTGATAACACGCCGGGAT
GAGGAAATGGCACCCTTCATTGCAGGATCAAGGCGGAACTACATATTCAGTGGTATATGT
AGTGTTGCTTCAAATGCATCAATCAAGGCTTTGGCTGATTTGAAATCTATCAACCTGTTT
GGAGTTCAGCAAATATGCCGTAATTCCATCGCACTGGAACAGGCTCTGGCTGCTATCCCC
TCGATAGACGGTGAGGCTGTGCAGTTGAGATTAGATCGTGTTAGAACGTACTATGAGCTG
TTGAACATGCCATTTGAGGCCCTACTTGCATTTATCGCGGAGCATGAGAACCTGTTTACA
TTTGCAGAGTACTCTGATCTTCTAAAGGTCCAGGTCCCGGGTAGGGAAATTCCAGCTGAT
GCACAAGATCGTGTAGCTGAAATTTTACCCCGCTAG

Peptide Sequence

PEP ID

XP_016469387.1
PEP Infomation

PREDICTED: exocyst complex component SEC8-like [Nicotiana tabacum]
Sequence

MGKFDLLPIPKDKSYLREELARVDENWAAARFDSLPHVVRILTSKDREGDVQVLKEQSEI
IEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTQSIGVLKGDLAEAKKLLGARNKQLHQ
LWYRSVTLRHIISLLDQIEGIAKVPARIEKLINEKQFYAAVQLHVQSALMLEREGLQTVG
ALQDVRSELTKLRGVLFYKVLEDLHAHLYNKGEYSSTLFSISERDDEVPTTVAVPLSMNN
SQPLSRRTRLLKGENQFGSFGPGDGSHRTSSIDGSSVAEGHDEDGEDTVSDGYPTSLRIN
GTDGASKDVKMVSHQIPTWLSDSTPDEFVEAIRKTEAPLHVKYLQTMVECLCMLGKVAAA
GAIICQRLRPTIHEIITTKIKAHAENAPRPGIGQAAQAAITGLHYLKGQLESFQSSKQKH
QNGIYLAVLLAVSPVSPVMAPTGTAQAAAKELLDSILDTVVHIFENHVIVGELLESKCSQ
QVDLNTPKSMPTDISWNPDSDASRDTGGYSIGFSLTVLQSECQQLICEILRATPEAASAD
AAVQTARLASKAPSKDKRDGSEDGLTFAFRFTDATLSISNQGVDLIRQGWSKRGSNVLQE
GYGTAAILPEQGIYLAASLYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHFLP
AMFVDYRKAVQQAISSPAAFRPRAHAVTSYTPLVEKGRPILQGLLAIDFLAKEVLGWAQA
MPKFAVALVNYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIENLMRRDPASTCLPC
SIGELNAENGAANAENLEVEMEISDTLLNLRPIRQENLIRDDNKLILLASLSDSLEYVAD
SIERLGKICPSTSNQVEENVKQKAPKHSRTSSIPPKDLTSFAEEYKKLAIDCLKVLRVEM
QLETIFHLQEMTSKEYLDDQDAEEPDDYIISLTSLITRRDEEMAPFIAGSRRNYIFSGIC
SVASNASIKALADLKSINLFGVQQICRNSIALEQALAAIPSIDGEAVQLRLDRVRTYYEL
LNMPFEALLAFIAEHENLFTFAEYSDLLKVQVPGREIPADAQDRVAEILPR

Transcript Sequence

Gene sequence data has not been registered.